All papers

Every preprint in the CCCURJ archive, newest first. Papers published in CCCURJ Flagship are also listed in its volumes.

October 2026

• Guide reselection expands canonical PAM candidates in an HGD editing resource for alkaptonuria William Zane Duncan, Annie de Paula Bento, Laura Nadia Cabrera, Quoc Huy Hoang, Maddison Lila Kahn, Zhuolang Li, Raj Mathur, Malaika Theresa Mekkattuparamban, Cristian Emanuel Vasquez, Yuritzia Alexandra Zaragoza, Giorgio Lagna · CCCURJ:2610.00014 · PDF
• Complete chloroplast genome of the federally endangered Menzies' wallflower Erysimum menziesii (Brassicaceae, Anthophyta) from California, USA Alondra G Aguilar, Pilar Arreguin, Isabel Bejar, Alejandra Castro, Millo D Chavarria, Oscar Chavez, Jacqueline Cruz-Martinez, Ruby J De la Cruz-Ortiz, Paloma L Degrandis-Figueroa, Kaleigh Gonzalez, Mayra E Gutierrez-Vargas, Mason Hill, Jeffery R Hughey, Cameron M Jones, Kayla Kennamore, Vanessa Lopez, Madry M Nelson, Itzel Lopez Magana, Jasmine Magana-Zavala, Brianna S Martinez, Vanessa Mendez Gutierrez, Brayan Mendoza, Jorge E Morales, Sarahi Ochoa, Rosalie Perea-Lopez, Judith Perez-Rizo, Dalyla Quiroz-Contreras, Emily C Ramirez, Fidel Ramirez, Izes Ramirez, Tatiana Rozin, Maria G Salazar, Paulina Saldana-Landeros, Joel Sosa, Joana Vega-Valencia, Andrea Villanueva, Ruby Villicana, Janet Zambrano · CCCURJ:2610.00013 · PDF
• Complete mitochondrial genome of the introduced Indian walking stick Carausius morosus (Lonchodidae, Insecta) from California Aiden Clarke, Alice Trujillo, Andres Mandujano, Angelica G Fernandez, Aniyah Chambers, Areli Ruiz Nunez, Audri Contreras, Benny Cuevas, Caitlin Collins, Christian B Trujillo, Claudia L Dominguez-Trejo, Danilo E Bustamante, Eduardo Pantoja-Garcia, Elizabeth Anguiano, Emily D Alcaraz, Felipe Rodriguez, Flavio C Mora, Froylan Tinoco Rivera, Gladys Cabrera Luis, Hailey B Nava, Henry N Huynh, Javier C Diaz, Jeffery R Hughey, Jenny Do, Jeriel S Sevilla, Jessica C Llaja, Jessica Lopez, Jesus Rosas, Jhordy Perez, Johann E Oyola, Jois V Carrion, Joni J Black, Jorge F Chavez, José I Barboza, Juan Pablo Rodriguez Cortes, Konnor L Barrett, Lacey E Prescott, Layla Alvarez, Lizbet Merino Juarez, Maria J Velasquez-Moreno, Mariah I Marquez-Gonzalez, Mariana Aguirre Linares, Maricela Chavez-Huigo, Martha S Calderon, Mateo Brambila, Maximiliano Villa, Mia J Windham, Michael Perez, Natalie Trujillo, Pearl Chenevert, Phoebe Lewis, Pilar Guiop, Reema Y Mubarz, Roberto Garcia Velazquez, Rosmery Y Ayala-Tocto, Samantha Santos, Samia L J Fernandez-Güimac, Sandra R Zalasar, Smith E Aguilar-Trauco, Soledad Duran, Stephanie Solis, Steven L Meza, Taym Al-Zuhairi, Victor M Padilla, Yadhira M Olano, Yareli Alfaro Maldonado, Hartnell College Genomics Group · CCCURJ:2610.00012 · PDF
• Complete Chloroplast Genome Sequence of the Western Poison Oak, Toxicodendron diversilobum (Anacardiaceae), from California Laura I Huitron Vazquez, Perla E Aviles, Samantha A Bailon, Abner G Cabanillas, Andrea Fernandez, Juan I Galarza, Brianna Guerrero, Araceli B Hernandez, Daniel Hernandez, Khegan Jarrett, Tong Li, Francisco J Maravillo, Magdalena Moreno, Azalea Perez, Nathan A Rosales, Hunter F Ruegg, Joel Valdez, Kyla Mae Bravo, Vidal L Chávez, Daisy I Diaz, Daniela Enriquez, Edgar L Martinez, Jesus Mendoza Padilla, Jose Meza, Scott V Nelson, Crystal Quintero-Ahumada, Adriene Mariah Ramirez, Jeffery R Hughey · CCCURJ:2610.00011 · PDF
• Meta-Analysis of the Expansion in the Field of Structural Biology of ABC Transporters Soomi Kim, Teena Bajaj, Cole Chabon, Eric Tablante, Tatyana Kulchinskaya, Tae Seok Moon, Ruchika Bajaj · CCCURJ:2610.00010 · PDF
• The complete chloroplast genome of the threatened Napa False Indigo Amorpha californica var. napensis Jeps. 1925 (Fabaceae) from Northern California, USA Hartnell College Genomics Group, Ivan D Agudelo, Griselda Aldaco, Angel Brito-Pizano, Kimberly G Chavez, Karina G Cortina, Jorge Flores, Alejandro Fuentes, Adam N Garcia, Alejandro Garcia, Daniel Gonzalez-Martinez, Jennifer Hernandez Ramos, Jeffery R Hughey, Fernando R Katada, Felix A Leon, Maleny P Lopez, Sandra Z Lopez, Aileen G Mendoza, Maritta Molina, Asmahan Muhrram, Daisy Ortiz-Matias, Tonantzin E Ortiz, Alicia Pacheco, Nandini Patel, Paz M Ramirez, Jennifer L Scaramuzzino, Alexandria Soto, Richard A Stabler, Jessica M Vidauri, Jose Villicana, James A Yhip · CCCURJ:2610.00009 · PDF
• Metagenomic Insights into the Composition and Function of Microbes Associated with the Rootzone of Datura inoxia Savanah Senn, Kelly Pangell, Adrianna L Bowerman · CCCURJ:2610.00008 · PDF
• The complete mitochondrial genome of the strawberry aphid Chaetosiphon fragaefolii Cockerell, 1901 (Hemiptera: Aphididae) from California, USA Miguel Acosta, Diana Alcantar, Ivan Alier-Reyes, Carlos Alvarez, Crystal B Arroyo, David Calderon, David Cardenas, Alejandro R Castro, Janelle K Companion, Cristian Constante, Evelyn S Diaz Telles, Gabriel Fletes, Fatima C Gama, Celia Garcia Perez, Abigail Garcia, Bailey Garcia, Brandon S Gutierrez, Karina L Guzman, Cecilia Hernandez, Jeffery R Hughey, Monica Ibarra Flores, Adilene I Jacobo, Brianna Lopez, Norma C Lopez-De Leon, Jaden D Martinez, Nayelli Mendoza, Kimberly Perez, Lucio J Perez, Milagros Perez-Moreno, Caitlin D Pineda, Elizabeth Pinedo, Julissa G Portillo, Anais Rico, Laura V Ruiz, Genevie M Serrano, Kalia M Sheldon, Hiroki Terada, Victoria A Trujillo, Clarissa Vazquez-Ramos, Frank Wang, Dawn Flora, Felipe G Zavala, Hartnell College Genomics Group · CCCURJ:2610.00007 · PDF
• The complete mitochondrial and plastid genomes of the invasive marine red alga Caulacanthus okamurae (Caulacanthaceae, Rhodophyta) from Moss Landing, California, USA Hartnell College Genomics Group, Alejandro Aguilar, Tania J Ahumada, Noemi Amezcua Moreno, Jacob Bohn, Danilo E Bustamante, Martha S Calderon, Edgar Cardoso, Rocio Carranza, Maria Castillo, Elizabeth Cazares, Emmanuel Cazares, Janelle K Companion, Jeanette Cruz, Neovid Cuevas, Lizbeth De La Torre, Daniel P Dietz, Kathleen M Fernando, Bryan Garcia, Pamela Gomez, Bianca Gonzales-Miramontes, Yuviana Hernandez, Kayla Huaracha, Jeffery R Hughey, Gabriela Lazaro, Feifei Zhai Lorenzo, Diana Medrano, Ailen Mendoza, Daniel Mendoza, Adam Mohssin, Jeanette Orozco Medina, Aislinn Pacheco, Gustavo Palacios Ruvalcaba, Jankiben Patel, Jatin Patel, Samantha Patino, Karina Perez-Alfaro, Alejandra N Ponce, Jasmine G Poso, Gabriel Ramirez, Hector A Ramirez, Nathalie Resendiz, Rachelle Reyno, Diego Rodriguez, Ian A Russell, Paola Saenz-Verdugo, Angel S Carmona, Fabian Sanchez, Sabrina X Sheffer, Carmen Solorio, Alejandra Soto Trujillo, Geraldine S Vasaya, Victoria Velasquez Lopez · CCCURJ:2610.00006 · PDF
• The complete mitogenome of the invasive Japanese mud snail Batillaria attramentaria (Gastropoda: Batillariidae) from Elkhorn Slough, California, USA Hartnell College Genomics Group, Paulina Andrade, Lisbeth Arreola, Melissa Belnas, Estefania Bland, Araceli Castillo, Omar Cisneros, Valentin Contreras, Celeste Diaz, Kevin T Do, Carlos Donate, Estevan Espinoza, Nathan Frater, Garry G Gabriel, Eric A Gomez, Gino F Gonzalez, Myrka Gonzalez, Paola Guido, Dylan Guidotti, Mishell Guzman Espinoza, Ivan Haro, Javier Hernandez Lopez, Caden E Hernandez, Karina Hernandez, Jazmin A Hernandez-Salazar, Jeffery R Hughey, Héctor Jácome-Sáenz, Luis A Jimenez, Eli R Kallison, Mylisa S King, Luis J Lazaro, Feifei Zhai Lorenzo, Isaac Madrigal, Savannah Madruga, Adrian J Maldonado, Alexander M Medina, Marcela Mendez-Molina, Ali Mendez, David Murillo Martinez, David Orozco, Juan Orozco, Ulises Ortiz, Jennifer M Pantoja, Alejandra N Ponce, Angel R Ramirez, Israel Rangel, Eliza Rojas, Adriana Roque, Beatriz Rosas, Colt Rubbo, Justin A Saldana, Elian Sanchez, Alicia Steinhardt, Maria O Taveras Dina, Judith Torres, Silvestre Valdez-Mata, Valeria Vargas, Paola Vazquez, Michelle M Vazquez, Irene Vidales, Frances L Wong, Christian S Zagal, Santiago Zamora, Jesus Zepeda Amador · CCCURJ:2610.00005 · PDF
• Light up My Life: An Active Learning Lab to Elucidate Conductive Properties of Electrolytes Christina Lee, Nay Chi P Naing, Daisy Herrera, Gerardo Aguirre, Brandon Rodriguez, Jared Ashcroft · CCCURJ:2610.00004 · PDF